Publications

Gal Haspel, Edward S Boyden, Jeffrey Brown, George Church, Netta Cohen, Christopher Fang-Yen, Steven Flavell, Miriam B Goodman, Anne C Hart, Oliver Hobert, Konstantinos Kagias, Shawn Lockery, Yangning Lu, Adam Marblestone, Jordan Matelsky, Hanspeter Pfister, Horacio G Rotstein, Monika Scholz, Eli Shlizerman, Quilee Simeon, Michael A Skuhersky, Vivek Venkatachalam, Guangyu Robert Yang, Eviatar Yemini, Manuel Zimmer, Konrad P Kording (2024). To reverse engineer an entire nervous system. arXiv.

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Adam A. Atanas, Jungsoo Kim, Ziyu Wang, Eric Bueno, McCoy Becker, Di Kang, Jungyeon Park, Talya S. Kramer, Flossie K. Wan, Saba Baskoylu, Ugur Dag, Elpiniki Kalogeropoulou, Matthew A. Gomes, Cassi Estrem, Netta Cohen, Vikash K. Mansinghka, Steven W. Flavell (2023). Brain-wide representations of behavior spanning multiple timescales and states in C.~elegans. Cell.

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Thomas Ilett, Omer Yuval, Thomas Ranner, Netta Cohen, David C. Hogg (2023). 3D Shape Reconstruction of Semi-Transparent Worms. Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR).

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Thomas Ilett (2023). How worms move in 3D.

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Gal Haspel, Netta Cohen (2022). Neurodevelopment: Maintaining function during circuit reconfiguration. Current Biology.

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Yongxing Wang, Thomas Ranner, Thomas Ilett, Yan Xia, Netta Cohen (2022). A monolithic optimal control method for displacement tracking of Cosserat rod with application to reconstruction of C. elegans locomotion. Computational Mechanics.

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Omer Yuval (2022). The neuromechanical control of Caenorhabditis elegans head motor behavior in a 3D environment.

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Martijn P. J. Dekkers, Felix Salfelder, Tom Sanders, Oluwatoroti Umuerri, Netta Cohen, Gert Jansen (2021). Plasticity in gustatory and nociceptive neurons controls decision making in C. elegans salt navigation. Communications Biology.

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Gal Haspel, Kristen E. Severi, Lisa J. Fauci, Netta Cohen, Eric D. Tytell, Jennifer R. Morgan (2021). Resilience of neural networks for locomotion. The Journal of Physiology.

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Christopher A. Brittin, Steven J. Cook, David H. Hall, Scott W. Emmons, Netta Cohen (2021). A multi-scale brain map derived from whole-brain volumetric reconstructions. Nature.

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Jack E. Denham (2021). Neuromechanical modelling of textitC. elegans locomotion: proprioceptive feedback in the ventral nerve cord.

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Felix Salfelder, Omer Yuval, Thomas Ilett, David C. Hogg, Thomas Ranner, Netta Cohen (2021). Markerless 3D spatio-temporal reconstruction of microscopic swimmers from video. 25th Int. Conf. Proc. Pattern Recognit..

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Lan Deng, Jack E. Denham, Charu Arya, Omer Yuval, Netta Cohen, Gal Haspel (2020). Inhibition Underlies Fast Undulatory Locomotion in Caenorhabditis elegans. eNeuro.

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Jinyang Chung, Christopher A. Brittin, Stephen D. Evans, Netta Cohen, Jung-uk Shim (2020). Rotatable microfluidic device for simultaneous study of bilateral chemosensory neurons in Caenorhabditis elegans. Microfluid Nanofluid.

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Thomas Ranner (2020). A stable finite element method for low inertia undulatory locomotion in three dimensions. Applied Numerical Mathematics.

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Netta Cohen, Jack E. Denham (2019). Whole animal modeling: piecing together nematode locomotion. Current Opinion in Systems Biology.

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Jack E. Denham, Thomas Ranner, Netta Cohen (2018). Signatures of proprioceptive control in Caenorhabditis elegans locomotion. Philosophical Transactions of the Royal Society B: Biological Sciences.

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Elpiniki Kalogeropoulou (2018). Role of the SAA and SMB neurons in locomotion in the nematode textitCaenorhabditis elegans, with a focus on steering.

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Christopher A. Brittin (2017). A systems analysis of neural connectivity and functionality in textitCaenorhabditis elegans.

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Netta Cohen, Thomas Ranner (2017). A new computational method for a model of textitCaenorhabditis elegans locomotion: Insights into elasticity and locomotion performance. normalfonthrefhttps://arxiv.org/abs/1702.04988arXiv:1702.04988.

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D. Dipon Ghosh, Tom Sanders, Soonwook Hong, Li Yan McCurdy, Daniel L. Chase, Netta Cohen, Michael R. Koelle, Michael N. Nitabach (2016). Neural Architecture of Hunger-Dependent Multisensory Decision Making in C.~elegans. Neuron.

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Netta Cohen, Tom Sanders (2014). Nematode locomotion: dissecting the neuronal–environmental loop. Current Opinion in Neurobiology.

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Tom Sanders, Netta Cohen (2013). Exploring minimal models of sensory integration in nematode C. elegans. BMC Neurosci Neuroscience.

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Tom Sanders, Netta Cohen (2012). Understanding plasticity of chemotaxis in C. elegans, a computational model of associative learning. BMC Neurosci Neuroscience.

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David R Williamson, Netta Cohen (2012). Size matters: modeling the effects of body shape on locomotive behavior in the nematode C. elegans. BMC Neurosci Neuroscience.

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Cohen Netta (2012). The worm turns: neural control of nematode locomotion. Front. Behav. Neurosci..

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Jordan H. Boyle, Stefano Berri, Netta Cohen (2012). Gait Modulation in C. elegans: An Integrated Neuromechanical Model. Front. Comput. Neurosci..

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Jordan H. Boyle, Stefano Berri, Manlio Tassieri, Ian A. Hope, Netta Cohen (2011). Gait Modulation in C. Elegans: It′s Not a Choice, It′s a Reflex!. Front. Behav. Neurosci..

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Peter A Appleby, Netta Cohen (2010). A computational model of associative learning and chemotaxis in the nematode worm C. elegans. BMC Neurosci Neuroscience.

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Netta Cohen, Jordan H. Boyle (2010). Swimming at low Reynolds number: a beginners guide to undulatory locomotion. Contemporary Physics.

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Bao Kha Nguyen, Jordan H. Boyle, Abbas A. Dehghani-Sanij, Netta Cohen (2009). A C. elegans-inspired micro-robot with polymeric actuators and online vision. 2009 IEEE International Conference on Robotics and Biomimetics (ROBIO).

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Stefano Berri, Jordan H. Boyle, Manlio Tassieri, Ian A. Hope, Netta Cohen (2009). Forward locomotion of the nematode C. elegans is achieved through modulation of a single gait. HFSP Journal Journal.

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Jordan H. Boyle (2009). textitC. elegans locomotion: an integrated approach.

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Jordan H. Boyle, Netta Cohen (2008). Caenorhabditis elegans body wall muscles are simple actuators. Biosystems.

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John Bryden, Netta Cohen (2008). Neural control of Caenorhabditis elegans forward locomotion: the role of sensory feedback. Biol Cybern.

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Jordan H. Boyle, John Bryden, Netta Cohen (2007). An Integrated Neuro-mechanical Model of C. elegans Forward Locomotion. Neural Information Processing.

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John Bryden, Netta Cohen (2004). A simulation model of the locmotion controllers for the nematode textitCaenorabditis elegans. From Animals to Animats 8: Proceedings of the Seventh [ie Eighth] International Conference on Simulation of Adaptive Behavior.

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